miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aristolochia fimbriata



ABOUT THIS RECORD

ID: MNEST045196
species: Aristolochia fimbriata
miRNA family: MIR160
source: microPC, original name: miR160

Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCGAGGAGCCAAGCA

mismatches: 3
bulges: 0

View larger
pre-miRNA
TGCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGCA

dot-bracket secondary structure
.((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).)).


SIMILARITIES
miRBase vvi-MIR160c: 0.000000000004

PMRD vvi-miR160c: 0.000000000004

microPC miR160: 9e-41
UniProt no hits

RFAM mir-160: 0.00000000007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;